run_get_good_pae.sh crashes in homo-oligomeric mode when monomers are present about alphapulldown HOT 7 CLOSED

I think this is because at least one of the homooligomers is a monomer?

I haven't updated the image yet but will avoid the crash if there is monomer

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Is there any monomer in the directory btw?

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Just to check if that ModuleNotFoundError: No module named 'jax' error still exists? I tried the display_pae_plots() on the same directory after activating the env with the latest alphapulldown and it finished without any error.

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Yeah, am getting "ModuleNotFoundError: No module named 'jax' error" on mac but because the AlphaPulldown installation instruction does work on mac .... - can't install jax because of some version conflicts. It worked with previous versions of AP.

(AlphaPulldown) hinox:~ kosinski$ pip install -q "jax[cuda]>=0.3.8,<0.4" -f https://storage.googleapis.com/jax-releases/jax_cuda_releases.html
ERROR: Cannot install jax[cuda]==0.3.10, jax[cuda]==0.3.11, jax[cuda]==0.3.12, jax[cuda]==0.3.13, jax[cuda]==0.3.14, jax[cuda]==0.3.8 and jax[cuda]==0.3.9 because these package versions have conflicting dependencies.
ERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/topics/dependency-resolution/#dealing-with-dependency-conflicts

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Now the new image is uploaded here https://oc.embl.de/index.php/s/cDYsOOdXA1YmInk

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