GPU seems not working when run_multimer_jobs.py about alphapulldown HOT 5 CLOSED

@dingquanyu I reinstall tensorflow with the following:

conda install tensorflow-gpu==2.14.0 -c conda-forge

from alphapulldown.

Hi @HUST6324 ,

Sorry that this error occurred. AlphaPulldown uses TensorFlow 2.14.0, which, according to TensorFlow's website, needs CUDA 11.8 and cuDNN 8.7. Source: https://www.tensorflow.org/install/source#tested_build_configurations However, I am not 100% sure if using cuDNN 8.6 caused this issue of yours. If you have the permission to install cuDNN yourself, could you try installing cuDNN 8.7?

In addition, in your current conda environment, could you run the following:

import tensorflow
tensorflow.config.list_physical_devices('GPU')

and let me know whether it return you with an empty list.

Yours
Dingquan

from alphapulldown.

Thanks for reply! @dingquanyu
I found that Tensorflow wasn't installed properly when i checked with codes above.My bad！！As I reinstalled TensorFlow 2.14.0,run_multimer_jobs.py worked properly.Thanks a lot!!

from alphapulldown.

Thanks for reply! @dingquanyu I found that Tensorflow wasn't installed properly when i checked with codes above.My bad！！As I reinstalled TensorFlow 2.14.0,run_multimer_jobs.py worked properly.Thanks a lot!!

@HUST6324 thank you for the update! Glad it is solved. Could you pls send the re-installation command here as well? I think @polya18 had the same issue in #339 and I may need to update the installation instruction in the README.

Yours
Dingquan

from alphapulldown.

@dingquanyu I reinstall tensorflow with the following:

conda install tensorflow-gpu==2.14.0 -c conda-forge

Hi @polya18 could you use this command and reinstall your tensorflow? Hope it will help.

from alphapulldown.