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License: MIT License
Simulation, visualization, and inference of individual level infectious disease models with Julia
License: MIT License
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cc: @jangevaare
Your package looks very exiting. I'm a statistician working with simulator based statistical models and infectious disease modeling is one important application. Do you have experience with other disease simulators such as EMOD. How do they compare to Pathogen.jl?
Hi,
Thanks for the great package! I wonder how much work would be required to connect the simulator here to https://github.com/TuringLang/Turing.jl. Perhaps the Turing team can help with this effort too. Looking forward to hearing from you.
Regards,
Mohamed
Hi,
I am having some difficulty replicating the SIR-TN-ILM Simulation and Inference.ipynb
Specifically at this line: obs = observe(sim, Uniform(0.5, 2.5), Uniform(0.5, 2.5), force=true)
I get an argument error, ArgumentError: Uniform: the condition a < b is not satisfied.
The stacktrace brings me to EventObservations.jl, where I modified default_rng to be MersenneTwister based on an error that I got previously(i..e that default_rng is not defined).
Would you have any guidance on this?
Thank you
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