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cellxgene-gateway

Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cellxgene) with multiple datasets.

cellxgene-gateway-docker

cell-x-gene gateway as docker service

chunksub

Submit chunked jobs to qsub-based clusters

compbio_benchmark

containerize-conda

Turn an existing conda environment into a Singularity container

copykat

corona-test

current-topics-bioinformatics-lecture

cytosig

dandelion

dandelion - A single cell BCR-seq analysis package for 10X Chromium 5' data

dask-on-slurm

Tutorial on how to run dask on a SLURM cluster.

datascience-containers

Personal docker base images

dfply

dplyr-style piping operations for pandas dataframes

diffxpy

Differential expression analysis for single-cell RNA-seq data.

docker-netextender

Dell SonicWALL NetExtender Docker Image based on hjoest/netextender image.

dplyr

dplyr: A grammar of data manipulation

dropseqpipe

A SingleCell RNASeq pre-processing pipeline built on snakemake

easybuild-easyconfigs

A collection of easyconfig files that describe which software to build using which build options with EasyBuild.

eatwise

exchange_rates

Comparing exchange rates of Raiffeisenbank and Commerzbank

fantom5-sig

Extracting cell specific gene signatures from FANTOM5

fieldpapers

Like walking, but with paper.

freeage

An open-source reimplementation of the game engine of Age of Empires 2: Definitive Edition.

geometadb-consistency

Checking GEOmetadb for consistency

geominer

GEO data download and parsing

geos

Google Earth Overlay Server - display map overlays in Google Earth

get_version

Automatically use the latest “vX.X.X” tag as version in your Python package

git_test-1

git_training2

Demo repo for git training at ICBI (Sept 2020)

grammarly

Unofficial Grammarly VS Code Extension