finsberg / cookiecutter-pypackage Goto Github PK

I'm Henrik Finsberg, a Senior Research Engineer working at Simula Research Laboratory in department of Computational Physiology in Oslo, Norway🇳🇴.

I care about reproducibility and good software design. I work primarily with Python but also do some work with JavaScript, C and C++. Recently, I am also trying to pick up Rust.

I work actively on creating tools and guidelines for reproducible research software in the section for scientific computing

• GitHub organization
• Homepage

A few open source projects I work on

• ap_features - Library for computing features for action potential traces
• mps - Tool for working with cardiac MPS data
• mps-motion - Motion tracking software for cardiac MPS data
• gotran - Library for declaring and translating ODEs
• goss - General ODE system solver

I am also an active user of FEniCS and are working on adopting several of my packages to FEniCSx including

• simcardems - Simula Cardiac ElectroMechanics Solver (FEniCSx version is coming in the future)
• fenics-pulse and fenicsx-pulse - Simulation software for cardiac mechanics
• fenics-plotly and fenicsx-plotly Library for plotting object with plotly
• ldrb - Library for creating rule-based fiber orientations (FEniCSx version is coming in the future)