bogovicj / embobioimage2023_registration Goto Github PK

There's a '/bogociv' subdirectory in the download script which should be:

index ea3d7c7..f5ec35a 100755
--- a/downloadSampleImages
+++ b/downloadSampleImages
@@ -8,7 +8,7 @@ then
     ln -s /scratch/JFRCtemplate2010.nrrd ./sampleImages
 else
     echo "grab 10"
-    curl -L -o './sampleImages/bogovic/JFRCtemplate2010.nrrd' $jrc10_url
+    curl -L -o './sampleImages/JFRCtemplate2010.nrrd' $jrc10_url
 fi

Fabulous work John!
Thank you so much for sharing!

If not working on an EMBL's BAND Platform, the last line in the Setup instructions reads:
"3. Set up your environment, if necessary (see below)"

I am not sure I find the "below" referred to.
I did however find the nice setup script in the code though. A small pointer to that one may be useful.

( In case you wish to give more info on how to set up a micromamba/conda env., here's a repo of a friend of mine which gives a bit more details. )