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Name: John Bogovic
Type: User
Company: HHMI Janelia Research Campus
Location: Washington DC metro area
Name: John Bogovic
Type: User
Company: HHMI Janelia Research Campus
Location: Washington DC metro area
These are additional perl/shell scripts that are intended to support my AnalysisSuite package
A curated list of awesome Janelia software
bigdataviewer experiments
A minimalist and modern Beamer theme
Collaborative volume annotation and segmentation with BigDataViewer
Another repo for bdv tools.
ImgLib2-based viewer for registered SPIM stacks and more
Helpers to use BigDataViewer as a quick visualization tool in other projects.
Fiji plugins for starting BigDataViewer and exporting data.
ImgLib2/BDV implementation of Stitching for large datasets
A tool for manual pointwise deformable registration using bigdataviewer.
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
Java tools
my settings
Drosophila Adult Brain Domains
Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix
Super-resolve anisotropic EM data along low-res axis with deep learning
Materials for the advanced image registration section of the "Advanced methods in bioimage analysis" EMBO 2023 course
A wild collection of useful and partially broken scripts for Fiji and TrakEM2
Get Your Brain Straight Neuroimage Registration Workshops and Hackathons
Experimental code
Use N5, ImgLib2-Cache, and Spark
2D sections to 3D atlas registration with Fiji and QuPath
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.