bionlplab / radtext Goto Github PK
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License: MIT License
Python Radiology Text Analysis System
License: MIT License
Dear author,
Thanks for your public code. I try to apply this code in my nlp task. Durning environment configuration, I find that "https://raw.githubusercontent.com/bionlplab/radtext-resources/main/resources/regex_patterns.yml" is 404 error by download --all
I am using last commit on master branch,
calling the pipeline from radtext with this code,
import radtext
nlp = radtext.Pipeline()
falling to the following error:
loading model /Users/zakaria/.radtext/bllipparser/BLLIP-GENIA-PubMed ...
Traceback (most recent call last):
File "test.py", line 5, in
nlp = radtext.Pipeline()
File "../radtext/src/radtext/models/pipeline.py", line 98, in init
regex_actor.load_yml2(argv['--regex_patterns'])
File "../radtext/src/radtext/models/neg/match_regex.py", line 70, in load_yml2
for obj in objs['negation']:
KeyError: 'negation'
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