bio-phys / hplusminus Goto Github PK

Hi,

when running the script, I get an error due to deprecated use of np.int (should be int):

Traceback (most recent call last):
File "/Users/andreashlarsen/Seafile/PostDocSund/Teaching/2024/FASEM/ellipsoid/stattest.py", line 180, in
results = evaluate.all_statistical_tests(R)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/anaconda3/lib/python3.11/site-packages/hplusminus/evaluate.py", line 34, in all_statistical_tests
num, blockLen, histo, edges = rld.get_run_length_distributions(signs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/anaconda3/lib/python3.11/site-packages/hplusminus/rld.py", line 44, in get_run_length_distributions
a = np.zeros(b.shape[0] + 2, dtype=np.int)
^^^^^^
File "/usr/local/anaconda3/lib/python3.11/site-packages/numpy/init.py", line 305, in getattr
raise AttributeError(former_attrs[attr])
AttributeError: module 'numpy' has no attribute 'int'.
np.int was a deprecated alias for the builtin int. To avoid this error in existing code, use int by itself. Doing this will not modify any behavior and is safe. When replacing np.int, you may wish to use e.g. np.int64 or np.int32 to specify the precision. If you wish to review your current use, check the release note link for additional information.
The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at:
https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations. Did you mean: 'inf'?