* installing *source* package ‘nloptr’ ...
** package ‘nloptr’ successfully unpacked and MD5 sums checked
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking how to run the C++ preprocessor... g++ -E
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether g++ accepts -g... (cached) yes
checking for pkg-config... yes
configure: Now testing for NLopt header file.
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking nlopt.h usability... no
checking nlopt.h presence... no
checking for nlopt.h... no
configure: Need to configure and build NLopt
configure: Starting to install library to /tmp/RtmpMM1rSS/R.INSTALL444d3709f0ad/nloptr/src/nlopt_src
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
hybrid.c: In function 'nlopt_result optimize_rect(double*, params*)':
hybrid.c:99:39: warning: 'nlopt_result nlopt_minimize(nlopt_algorithm, int, nlopt_func_old, void*, const double*, const double*, double*, double*, double, double, double, double, const double*, int, double)' is deprecated [-Wdeprecated-declarations]
stop->maxtime - (t - stop->start));
^
In file included from ../util/nlopt-util.h:30:0,
from hybrid.c:27:
../api/nlopt.h:329:28: note: declared here
NLOPT_EXTERN(nlopt_result) nlopt_minimize(
^~~~~~~~~~~~~~
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
newuoa.c: In function 'nlopt_result trsapp_(int*, int*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, const double*, const double*, const double*)':
newuoa.c:187:35: warning: 'nlopt_result nlopt_minimize_constrained(nlopt_algorithm, int, nlopt_func_old, void*, int, nlopt_func_old, void*, ptrdiff_t, const double*, const double*, double*, double*, double, double, double, double, const double*, int, double)' is deprecated [-Wdeprecated-declarations]
0., 0., 0., xtol, 1000, 0.);
^
In file included from ../util/nlopt-util.h:30:0,
from newuoa.h:4,
from newuoa.c:33:
../api/nlopt.h:339:28: note: declared here
NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained(
^~~~~~~~~~~~~~~~~~~~~~~~~~
newuoa.c: In function 'nlopt_result biglag_(int*, int*, double*, double*, double*, double*, int*, int*, int*, double*, double*, double*, double*, double*, double*, double*, double*, const double*, const double*, const double*)':
newuoa.c:1244:35: warning: 'nlopt_result nlopt_minimize_constrained(nlopt_algorithm, int, nlopt_func_old, void*, int, nlopt_func_old, void*, ptrdiff_t, const double*, const double*, double*, double*, double, double, double, double, const double*, int, double)' is deprecated [-Wdeprecated-declarations]
0., 0., 0., xtol, 1000, 0.);
^
In file included from ../util/nlopt-util.h:30:0,
from newuoa.h:4,
from newuoa.c:33:
../api/nlopt.h:339:28: note: declared here
NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained(
^~~~~~~~~~~~~~~~~~~~~~~~~~
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
deprecated.c: In function 'nlopt_result nlopt_minimize_constrained(nlopt_algorithm, int, nlopt_func_old, void*, int, nlopt_func_old, void*, ptrdiff_t, const double*, const double*, double*, double*, double, double, double, double, const double*, int, double)':
deprecated.c:153:60: warning: 'nlopt_result nlopt_minimize_econstrained(nlopt_algorithm, int, nlopt_func_old, void*, int, nlopt_func_old, void*, ptrdiff_t, int, nlopt_func_old, void*, ptrdiff_t, const double*, const double*, double*, double*, double, double, double, double, const double*, double, double, int, double)' is deprecated [-Wdeprecated-declarations]
xtol_rel, xtol_abs, ftol_rel, ftol_abs, maxeval, maxtime);
^
deprecated.c:65:15: note: declared here
NLOPT_STDCALL nlopt_minimize_econstrained(
^~~~~~~~~~~~~~~~~~~~~~~~~~~
deprecated.c: In function 'nlopt_result nlopt_minimize(nlopt_algorithm, int, nlopt_func_old, void*, const double*, const double*, double*, double*, double, double, double, double, const double*, int, double)':
deprecated.c:170:40: warning: 'nlopt_result nlopt_minimize_constrained(nlopt_algorithm, int, nlopt_func_old, void*, int, nlopt_func_old, void*, ptrdiff_t, const double*, const double*, double*, double*, double, double, double, double, const double*, int, double)' is deprecated [-Wdeprecated-declarations]
xtol_rel, xtol_abs, maxeval, maxtime);
^
deprecated.c:138:15: note: declared here
NLOPT_STDCALL nlopt_minimize_constrained(
^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:103:0:
f77funcs.h: In function 'void nloptc_(int*, const int*, const int*, nlopt_f77_func, void*, const int*, nlopt_f77_func, char*, char*, const double*, const double*, double*, double*, const double*, const double*, const double*, const double*, const double*, const int*, const int*, const double*)':
f77funcs.h:65:24: warning: 'nlopt_result nlopt_minimize_constrained(nlopt_algorithm, int, nlopt_func_old, void*, int, nlopt_func_old, void*, ptrdiff_t, const double*, const double*, double*, double*, double, double, double, double, const double*, int, double)' is deprecated [-Wdeprecated-declarations]
*maxeval, *maxtime);
^
In file included from f77api.c:26:0:
nlopt.h:339:28: note: declared here
NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained(
^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:103:0:
f77funcs.h: In function 'void nlogls_(int*, int*, int*)':
f77funcs.h:96:65: warning: 'void nlopt_get_local_search_algorithm(nlopt_algorithm*, nlopt_algorithm*, int*)' is deprecated [-Wdeprecated-declarations]
nlopt_get_local_search_algorithm(&deriv, &nonderiv, maxeval);
^
In file included from f77api.c:26:0:
nlopt.h:363:20: note: declared here
NLOPT_EXTERN(void) nlopt_get_local_search_algorithm(nlopt_algorithm *deriv,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:103:0:
f77funcs.h: In function 'void nlosls_(int*, int*, int*)':
f77funcs.h:104:64: warning: 'void nlopt_set_local_search_algorithm(nlopt_algorithm, nlopt_algorithm, int)' is deprecated [-Wdeprecated-declarations]
nlopt_set_local_search_algorithm(deriv, nonderiv, *maxeval);
^
In file included from f77api.c:26:0:
nlopt.h:366:20: note: declared here
NLOPT_EXTERN(void) nlopt_set_local_search_algorithm(nlopt_algorithm deriv,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:103:0:
f77funcs.h: In function 'void nlogsp_(int*)':
f77funcs.h:109:45: warning: 'int nlopt_get_stochastic_population()' is deprecated [-Wdeprecated-declarations]
*pop = nlopt_get_stochastic_population();
^
In file included from f77api.c:26:0:
nlopt.h:370:19: note: declared here
NLOPT_EXTERN(int) nlopt_get_stochastic_population(void) NLOPT_DEPRECATED;
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:103:0:
f77funcs.h: In function 'void nlossp_(const int*)':
f77funcs.h:113:42: warning: 'void nlopt_set_stochastic_population(int)' is deprecated [-Wdeprecated-declarations]
nlopt_set_stochastic_population(*pop);
^
In file included from f77api.c:26:0:
nlopt.h:371:20: note: declared here
NLOPT_EXTERN(void) nlopt_set_stochastic_population(int pop) NLOPT_DEPRECATED;
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:114:0:
f77funcs.h: In function 'void nloptc(int*, const int*, const int*, nlopt_f77_func, void*, const int*, nlopt_f77_func, char*, char*, const double*, const double*, double*, double*, const double*, const double*, const double*, const double*, const double*, const int*, const int*, const double*)':
f77funcs.h:65:24: warning: 'nlopt_result nlopt_minimize_constrained(nlopt_algorithm, int, nlopt_func_old, void*, int, nlopt_func_old, void*, ptrdiff_t, const double*, const double*, double*, double*, double, double, double, double, const double*, int, double)' is deprecated [-Wdeprecated-declarations]
*maxeval, *maxtime);
^
In file included from f77api.c:26:0:
nlopt.h:339:28: note: declared here
NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained(
^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:114:0:
f77funcs.h: In function 'void nlogls(int*, int*, int*)':
f77funcs.h:96:65: warning: 'void nlopt_get_local_search_algorithm(nlopt_algorithm*, nlopt_algorithm*, int*)' is deprecated [-Wdeprecated-declarations]
nlopt_get_local_search_algorithm(&deriv, &nonderiv, maxeval);
^
In file included from f77api.c:26:0:
nlopt.h:363:20: note: declared here
NLOPT_EXTERN(void) nlopt_get_local_search_algorithm(nlopt_algorithm *deriv,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:114:0:
f77funcs.h: In function 'void nlosls(int*, int*, int*)':
f77funcs.h:104:64: warning: 'void nlopt_set_local_search_algorithm(nlopt_algorithm, nlopt_algorithm, int)' is deprecated [-Wdeprecated-declarations]
nlopt_set_local_search_algorithm(deriv, nonderiv, *maxeval);
^
In file included from f77api.c:26:0:
nlopt.h:366:20: note: declared here
NLOPT_EXTERN(void) nlopt_set_local_search_algorithm(nlopt_algorithm deriv,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:114:0:
f77funcs.h: In function 'void nlogsp(int*)':
f77funcs.h:109:45: warning: 'int nlopt_get_stochastic_population()' is deprecated [-Wdeprecated-declarations]
*pop = nlopt_get_stochastic_population();
^
In file included from f77api.c:26:0:
nlopt.h:370:19: note: declared here
NLOPT_EXTERN(int) nlopt_get_stochastic_population(void) NLOPT_DEPRECATED;
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:114:0:
f77funcs.h: In function 'void nlossp(const int*)':
f77funcs.h:113:42: warning: 'void nlopt_set_stochastic_population(int)' is deprecated [-Wdeprecated-declarations]
nlopt_set_stochastic_population(*pop);
^
In file included from f77api.c:26:0:
nlopt.h:371:20: note: declared here
NLOPT_EXTERN(void) nlopt_set_stochastic_population(int pop) NLOPT_DEPRECATED;
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:129:0:
f77funcs.h: In function 'void NLOPTC(int*, const int*, const int*, nlopt_f77_func, void*, const int*, nlopt_f77_func, char*, char*, const double*, const double*, double*, double*, const double*, const double*, const double*, const double*, const double*, const int*, const int*, const double*)':
f77funcs.h:65:24: warning: 'nlopt_result nlopt_minimize_constrained(nlopt_algorithm, int, nlopt_func_old, void*, int, nlopt_func_old, void*, ptrdiff_t, const double*, const double*, double*, double*, double, double, double, double, const double*, int, double)' is deprecated [-Wdeprecated-declarations]
*maxeval, *maxtime);
^
In file included from f77api.c:26:0:
nlopt.h:339:28: note: declared here
NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained(
^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:129:0:
f77funcs.h: In function 'void NLOGLS(int*, int*, int*)':
f77funcs.h:96:65: warning: 'void nlopt_get_local_search_algorithm(nlopt_algorithm*, nlopt_algorithm*, int*)' is deprecated [-Wdeprecated-declarations]
nlopt_get_local_search_algorithm(&deriv, &nonderiv, maxeval);
^
In file included from f77api.c:26:0:
nlopt.h:363:20: note: declared here
NLOPT_EXTERN(void) nlopt_get_local_search_algorithm(nlopt_algorithm *deriv,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:129:0:
f77funcs.h: In function 'void NLOSLS(int*, int*, int*)':
f77funcs.h:104:64: warning: 'void nlopt_set_local_search_algorithm(nlopt_algorithm, nlopt_algorithm, int)' is deprecated [-Wdeprecated-declarations]
nlopt_set_local_search_algorithm(deriv, nonderiv, *maxeval);
^
In file included from f77api.c:26:0:
nlopt.h:366:20: note: declared here
NLOPT_EXTERN(void) nlopt_set_local_search_algorithm(nlopt_algorithm deriv,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:129:0:
f77funcs.h: In function 'void NLOGSP(int*)':
f77funcs.h:109:45: warning: 'int nlopt_get_stochastic_population()' is deprecated [-Wdeprecated-declarations]
*pop = nlopt_get_stochastic_population();
^
In file included from f77api.c:26:0:
nlopt.h:370:19: note: declared here
NLOPT_EXTERN(int) nlopt_get_stochastic_population(void) NLOPT_DEPRECATED;
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from f77api.c:129:0:
f77funcs.h: In function 'void NLOSSP(const int*)':
f77funcs.h:113:42: warning: 'void nlopt_set_stochastic_population(int)' is deprecated [-Wdeprecated-declarations]
nlopt_set_stochastic_population(*pop);
^
In file included from f77api.c:26:0:
nlopt.h:371:20: note: declared here
NLOPT_EXTERN(void) nlopt_set_stochastic_population(int pop) NLOPT_DEPRECATED;
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ar: `u' modifier ignored since `D' is the default (see `U')
ar: `u' modifier ignored since `D' is the default (see `U')
testopt.cpp: In function 'int test_function(int)':
testopt.cpp:223:21: warning: 'nlopt_result nlopt_minimize(nlopt_algorithm, int, nlopt_func_old, void*, const double*, const double*, double*, double*, double, double, double, double, const double*, int, double)' is deprecated [-Wdeprecated-declarations]
maxeval, maxtime);
^
In file included from testopt.cpp:44:0:
../api/nlopt.h:329:28: note: declared here
NLOPT_EXTERN(nlopt_result) nlopt_minimize(
^~~~~~~~~~~~~~
make[2]: *** No rule to make target 'nlopt-guile.cpp', needed by 'all'. Stop.
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2
make[1]: *** No rule to make target 'nlopt-guile.cpp', needed by 'install'. Stop.
make: *** [install-recursive] Error 1
./configure: line 3333: checking: command not found
configure: Done installing library to /tmp/RtmpMM1rSS/R.INSTALL444d3709f0ad/nloptr/src/nlopt_src
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating R/PkgFlags.R
** libs
g++ -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-oNcpyf/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dummy.cpp -o dummy.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -g -O2 -fdebug-prefix-map=/build/r-base-oNcpyf/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/tmp/RtmpMM1rSS/R.INSTALL444d3709f0ad/nloptr/src/nlopt_src/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-oNcpyf/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init_nloptr.c -o init_nloptr.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -g -O2 -fdebug-prefix-map=/build/r-base-oNcpyf/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -I/tmp/RtmpMM1rSS/R.INSTALL444d3709f0ad/nloptr/src/nlopt_src/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-oNcpyf/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nloptr.c -o nloptr.o
g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o nloptr.so dummy.o init_nloptr.o nloptr.o -lm -lm /tmp/RtmpMM1rSS/R.INSTALL444d3709f0ad/nloptr/src/nlopt_src/lib/libnlopt_cxx.a -L/usr/lib/R/lib -lR
installing to /home/renkun/R/x86_64-pc-linux-gnu-library/3.5/nloptr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (nloptr)