andreas-wilm Goto Github PK

2020-bushfire-challenge

agrep

AGREP - approximate GREP for fast fuzzy string searching. Files are searched for a string or regular expression, with approximate matching capabilities and user-definable records. Developed 1989-1991 by Udi Manber, Sun Wu et al. at the University of Arizona. ISC open source license since Sept. 2014.

andreas-wilm.github.io

My blog build with http://deanattali.com/beautiful-jekyll

andreaswilm.github.io

Andreas Wilm's Github Pages

arcashla

Fast and accurate in silico inference of HLA genotypes from RNA-seq

automl-with-genomicsdata

Example project for running Azure AutoML on genomics data

awesome-academic-graph

Awesome list for Microsoft Academic Graph

awesome-bionimformatics

Awesome list of Nim libraries used for Bioinformatics

azure-docs

Open source documentation of Microsoft Azure

azure-quickstart-templates

Azure Quickstart Templates

azure-training-course

bamsurgeon

tools for adding mutations to existing .bam files, used for testing mutation callers

bio-pipeline

My collection of light bioinformatics analysis pipelines for specific tasks

bioconda-recipes

Conda recipes for the bioconda channel.

ckan

CKAN is an open-source DMS (data management system) for powering data hubs and data portals. CKAN makes it easy to publish, share and use data. It powers datahub.io, catalog.data.gov and europeandataportal.eu/data/en/dataset among many other sites.

compbio-utils

miscellaneous bioinfo scripts

computerscience

Free tech resources for faculty, students, and dev advocates for use in computer science courses, workshops, and hackathons.

construct3

ConStruct: Construction of RNA consensus structures.

container-storage-setup

Service to set up storage for Docker and other container systems

cyclecloud-demotemplates

cyclecloud-dingo-compute

Cyclecloud compute cluster for ICRAR's Dingo

datasciencevm

Tools and Docs on the Azure Data Science Virtual Machine (http://aka.ms/dsvm)

dnazoo-uwa

cyclecloud template temporary

doc

Documentation of the Snakemake-Profiles project.

dotfiles

My dotfiles

dp-200-implementing-an-azure-data-solution

edu

emirge

EMIRGE reconstructs full length ribosomal genes from short read sequencing data.

famas

Yet another fastq massaging program

flowio

A Python library for reading and writing Flow Cytometry Standard (FCS) files