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yyxMosaicHunter

{yyxMosaicHunter} is an R package implemented MosaicHunter model using numerical algorithm, which could run for low-throughput ultra-high-depth sites in targeted sequencing, such as PASM.

I also implemented plug-in C codes using {Rcpp} to speed up the dynamic programming algorithm dealing with baseQs.

In the file yyxMosaicHunter_0.1.4.package.zip, yyxMosaicHunter_0.1.4.tar.gz contains the source code, while yyxMosaicHunter_0.1.4.zip in two release_* folders are the release for Windows platform.

Version 0.1.4 (2014-11-12) Author: Adam Yongxin Ye @ CBI

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