To use this code, you need to install MultiQC and then your code. For example:
# 环境配置
conda create -n multiqc multiqc
conda activate multiqc
git clone https://github.com/clinico-omics/chinese-quartet-rnaseq-report.git
cd rnaseq-report
pip install -r requirements.txt
pip install -e .
# 使用Multiqc命令
multiqc -h
Use python setup.py develop
if you're actively working on the code - then you don't need to rerun the installation every time you make an edit (though you still do if you change anything in setup.py
).
- post_alignment_qc/rnaseq_qc/和 post_alignment_qc/bam_qc/,这两个目录下所有文件名需要 samples_id.percent 形式,并且同一个样本两个目录下的 ID 要完全一致