library(devtools)

install_github("YaoZhou89/HDGENE")

library(HDGENE)

myGD = read.big.matrix("demo.dat",head=F,sep="\t",type="char")

myGM = read.table("demo.map",head=T)

myY = read.table("demo.txt",head=T)

myCV = read.table("demo.cov",head=T)

myHDGENE = HDGENE(Y = myY,GD = myGD,GM = myGM,CV = myCV, maxLoop = 10,file.out = T,model = "A")

myHDGENE = HDGENE(Y = myY,GD = myGD,GM = myGM,CV = myCV, maxLoop = 10,file.out = T,model = "AA")