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nanopore-amplicons's Introduction

Nanopore-Amplicons-Assembly

Goals of this project:

To De nove assemble Minion reads back to Amplicon sequences.

Project Descriptions:

Sixteen 10KB amplicons were sequenced in two Nanopore minion runs.

Software

  1. ont_albacore-0.8.4 and ont_albacore-1.1.0 (Basecaller)
  2. Samtools (Version 1.4)
  3. BWA (Version 0.7.12)
  4. BBMap (Version 37.00)
  5. Blat (Version 36x2)

nanopore-amplicons's People

Contributors

wijerasa avatar

Stargazers

Xu Xizhan avatar

Watchers

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