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corrplot

Package corrplot is for visualizing a correlation matrix

createkeggdb

Create KEGG.db Package

culturome

curatedmetagenomicdata

Curated and processed metagenomic data through ExperimentHub

dada2

Accurate sample inference from amplicon data with single nucleotide resolution

db

Scripts and databases for amplicon and metagenome

deblur

Deblur is a greedy deconvolution algorithm based on known read error profiles.

deeplearning-500-questions

深度学习500问，以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述，以帮助自己及有需要的读者。 全书分为18个章节，50余万字。由于水平有限，书中不妥之处恳请广大读者批评指正。 未完待续............ 如有意合作，联系[email protected] 版权所有，违权必究 Tan 2018.06

deeptools

Tools to process and analyze deep sequencing data.

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

dose

:mask: Disease Ontology Semantic and Enrichment analysis

easy_microbiome

R 16S

easyamplicon

Easy Amplicon data analysis pipeline

easymetagenome

Easy Metagenome Pipeline 2019 (1.0)

easystat

EasyStat

easystats

:milky_way: The R easystats-project

edmr

Optimized DMR analysis based on bimodal normal distribution model and cost function for regional methylation analysis.

enrichplot

Visualization of Functional Enrichment Result

etcher

Flash OS images to SD cards & USB drives, safely and easily.

gapit3

Genome Association Predict Integrate Tools

ggclusternet

Microbial ecological network visualization clustering

ggcor

Extended tools for correlation analysis and visualization.

ggcorrplot2

Implementation of corrplot using ggplot2

ggmsa

:traffic_light: Visualizing pubication-quality multiple sequence alignment using ggplot2

ggpubr

'ggplot2' Based Publication Ready Plots

ggstatsplot

Enhancing `ggplot2` plots with statistical analysis 📊🎨📣

ggtree

:christmas_tree:Visualization and annotation of phylogenetic trees

ggtree-current-protocols

Using ggtree to Visualize Data on Tree-Like Structure

ggtreeextra

:lemon: Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”

gosemsim

:golf: GO-terms Semantic Similarity Measures