vjcitn Goto Github PK
Name: Vince Carey
Type: User
Bio: Professor of Medicine, Channing Division of Network Medicine, Mass General Brigham, Harvard Medical School.
Location: Boston
Name: Vince Carey
Type: User
Bio: Professor of Medicine, Channing Division of Network Medicine, Mass General Brigham, Harvard Medical School.
Location: Boston
corrections to leeBamViews to permit use with Bioc 3.11, omitting GenomeGraphs usage
Implementation of the Leiden algorithm called by reticulate in R. (CRAN)
logical forests and logistic funnels
demonstrate HDF5 object store backed SE for LIHC 450k data
a github action, docker-based, to list dependencies of a bioc package
LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.
longArray Example
Use gensim with 988 abstracts for 43000 non-TCGA human transcriptomes in cancer
annotation support for lung disease SNP
metadata for (curated) metagenomics http://vjcitn.github.io/md4mg
Conversion and sharding for meffil GDS, and other utilities
measuring content and utility of sample-level annotation in genomic experiments
support for 2016 midterm
demonstrate odd Rcpp-related error, apparently macOS-specific
old but viable approach to working with diverse machine learning tools, with Bioc data structure inputs
Docker support for simpleSingleCell workflow of Aaron Lun/Bioconductor, in CWL
WDL workflow for QC phase of Aaron Lun's simpleSingleCell Bioconductor workflow
mobility demo package
Data structures and algorithms for MOWChIP (PMID 26214128)
WDL for MSIsensor stratification
msigTextM addressed text mining for catalogs of molecular signatures
Google Cloud Platform BigTable back end for MultiAssayExperiment (experimental)
Bioconductor package for management of multi-assay data
formula and other model specification tools for multiomics + MultiAssayExperiment
This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data)
a light talk on reproducibility, requested
a slide set on reproducibility in NHS use of R
NSforest manipulation
simple interface between OpenCRAVAT and Bioconductor
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.