vistalab Goto Github PK

psych204a

Human Neuroimaging Methods course materials

pydicom

Read, modify and write DICOM files with python code

qmr_web

retinalcurvature

Estimating the retinal curvature using rabbit and then human

rtp

Reproducible Tract Pipeline

rtp-bvec-flip-detect

Neuro detect leverages the possibilities of deep learning to automatically detect and correct formatting errors of MRI scan data.

rtp-pipeline

Docker based Gear that runs the Reproducible Tract Profiles (RTP) pipeline

rtp-preproc

RTP-preproc runs the mrTrix3 preprocessing pipeline in the diffussion data. It uses FSLs topup when the optional inverted phase encoding files are found, otherwise uses the eddy tool. It performs some other denoising steps, and it can normalize or align to acpc the data

scitran

Utilities to interact with Flywheel from the client side using the Matlab SDK.

scitran-data

Data Readers and Writers

teachmri

Routines for teaching MRI principles in Stanford's Psych 204A

vistacompile

Repository where we place special vistasoft functions that we compile for containers

vistadisp

vistasoft

VISTASOFT is the main software repository of the VISTA lab at Stanford University.

vistateach

Matlab tutorials for courses in reading, image science, and MR

vistatest