victoriastodden / summer2019 Goto Github PK

Author: Yang Yu, University of Illinois at Urbana-Champaign

Mentors: Prof. Victoria Stodden, University of Illinois at Urbana-Champaign

7/2: Find what exactly different projects contain.

1: Tale

2: Popper

3: ReproZip

4: Sumatra

5: Occam

6: Sciunits

7: Binder IS457:

1: Chard, Kyle & Willis, Craig & Gaffney, Niall & Jones, Matthew & Kowalik, Kacper & Ludäscher, Bertram & Nabrzyski, Jarek & Stodden, Victoria & Taylor, Ian & Turk, Matthew. (2019). Implementing Computational Reproducibility in the Whole Tale Environment. 17-22. 10.1145/3322790.3330594.

2: I. Jimenez, M. Sevilla, N. Watkins, C. Maltzahn, J. Lofstead, K. Mohror, A. Arpaci-Dusseau and R. Arpaci-Dusseau. (2017). The Popper Convention: Making Reproducible Systems Evaluation Practical. IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW), 1561–70. https://doi.org/10.1109/IPDPSW.2017.157.

3: F. Chirigati, D. Shasha and J. Freire, (2013). ReproZip: Using Provenance to Support Computational Reproducibility, 5th USENIX Workshop on the Theory and Practice of Provenance.

4: A. P Davison, M Mattioni, D Samarkanov, B Tele'nczuk. (2014). Sumatra: A Toolkit for Reproducible Research. In Implementing Reproducible Research, Eds: Stodden, V and Leisch, F and and Chapman, R D Peng, pp.57-79

5: L. Oliveira, D. Wilkinson, D. Mossé, and B. Childers. (2018). Supporting Long- term Reproducible Software Execution. In Proceedings of the First International Workshop on Practical Reproducible Evaluation of Computer Systems (P-RECS'18). ACM, New York, NY, USA, Article 6, 6 pages. DOI: https://doi.org/10.1145/3214239.3214245

6: Z. Yuan, D. Hai Ton That, S. Kothari, G. Fils, and T. Malik. (2018). Utilizing Provenance in Reusable Research Objects. Informatics, 5(1), 14; https://doi.org/10.3390/informatics5010014

7: Jupyter et al., (2018). Binder 2.0 - Reproducible, Interactive, Sharable Environments for Science at Scale." Proceedings of the 17th Python in Science Conference. doi:10.25080/Majora-4af1f417-011