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Van Andel Research Institute's Projects

snakemake icon snakemake

This is the development home of the workflow management system Snakemake. For general information, see

spaceshell icon spaceshell

Guide for analysis of spatial transcriptomic data

su2caws icon su2caws

tools for running su2c analyses on aws

svs2vsv icon svs2vsv

Process Aperio SVS images in S3 with vips/openslide.

telescope icon telescope

tools for analysis and visualization of spatial transcriptomic data

tenxtools icon tenxtools

Putting the fun in 10XGenomics gene expression analysis

va_ecls icon va_ecls

Technical description of analysis of scRNASeq data for VA-ECLS survival paper

vaicryotools icon vaicryotools

various tools used to support cryoem from an IT perspective

vaidocker icon vaidocker

centos 8 container for user admin on compute nodes

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