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TraitHub

This is a GitHub repository for the Tundra Trait Team database

primary contact: Anne Bjorkman [email protected]

Description

Motivation: The Tundra Trait Team (TTT) database includes field-based measurements of key traits related to plant form and function at multiple sites across the tundra biome. This dataset can be used to address theoretical questions about plant strategy and trade-offs, trait-environment relationships and environmental filtering, and trait variation across spatial scales, to validate satellite data, and to inform earth system model parameters.

Main types of variable contained: The database contains nearly 92,000 measurements of 18 plant traits. The most frequently measured traits (>1,000 observations each) include plant height, leaf area, specific leaf area, leaf fresh and dry mass, leaf dry matter content, leaf nitrogen content, leaf carbon content, leaf phosphorus content, seed mass, and stem specific density.

Spatial location and grain: Measurements were collected in tundra habitats in both the northern and southern hemispheres, including Arctic sites in Alaska, Canada, Greenland, Fennoscandia, and Siberia, alpine sites in the European Alps, Colorado Rockies, Caucasus, Ural Mountains, Pyrenees, Australian Alps, and Central Otago Mountains (New Zealand), and the sub-antarctic Marion Island. More than 99% of observations are georeferenced.

Time period and grain: All data were collected between 1964 and 2018. A small number of sites have repeated trait measurements at two or more time periods.

Major taxa and level of measurement: Trait measurements were made on 978 terrestrial vascular plant species growing in tundra habitats. Most observations are on individuals (86%), while the remainder represent plot or site means or maximums per species.

Data use guidelines

Data are publicly available using a Creative Commons Attribution 4.0 International copyright (CC BY 4.0). Data are fully public but should be appropriately referenced by citing the data paper [http://doi.org/10.1111/geb.12821]. Although not mandatory, we additionally suggest that data users contact and collaborate with data contributors (names provided in the “DataContributor” column, contact information available through the TTT website: https://tundratraitteam.github.io/) whose datasets have contributed a substantial proportion (e.g., 5% or greater) of trait observations used in a particular paper or analysis.

Data availability & access

The TTT database will be maintained at this GitHub repository (https://github.com/TundraTraitTeam) an archived 2018 version is also available in the following repo (https://github.com/ShrubHub/TraitHub). Trait data collection is ongoing; thus, we periodically release updated versions of the database. A new version number will be assigned every time there is a database update, and old database versions will be archived for reference. A static version of the cleaned database (v 1.0) will also be available at the Polar Data Catalogue (www.polardata.ca; CCI # 12949) and additionally submitted to the TRY plant trait database (www.try-db.org) for inclusion in the next TRY version release. Data retrieved through TRY are fully public but are subject to the usage guidelines outlined in TRY.

Citations:

When using TTT data please cite the following data paper as the original source:

Bjorkman AD, IH Myers-Smith, SC Elmendorf, S Normand, HJD Thomas, et al. 2018. Tundra Trait Team: A database of plant traits spanning the tundra biome. Global Ecology and Biogeography. doi: http://doi.org/10.1111/geb.12821

Primary research papers that use these data:

Bjorkman AD, IH Myers-Smith, SC Elmendorf, S Normand, N Rüger, et al. 2018. Changes in plant functional traits across a warming tundra biome. Nature. doi: http://doi.org/10.1038/s41586-018-0563-7

Thomas HJD, IH Myers-Smith, Bjorkman AD, SC Elmendorf, D Blok, et al. 2018. Traditional plant functional groups explain variation in economic but not size-related traits across the tundra biome. Global Ecology and Biogeography. doi: http://doi.org/10.1111/geb.12783

Thomas HJD, AD Bjorkman, IH Myers-Smith, SC Elmendorf, J Kattge, et al. 2020. Global plant trait relationships extend to the climatic extremes of the tundra biome. Nature Communications. doi: https://doi.org/10.1038/s41467-020-15014-4

Acknowledgements:

This dataset is an outcome of the sTundra working group supported by sDiv, the Synthesis Centre of the German Centre for Integrative Biodiversity Research (iDiv). We acknowledge the contributions many field assistants to trait data collection, and thank the governments, parks, field stations, and local and indigenous people for the opportunity to conduct research on their land.

traithub's People

Contributors

annebj avatar islams avatar

Stargazers

gingerlolipop avatar  avatar MFTorresJ avatar

Watchers

James Cloos avatar  avatar Erik Kusch avatar

traithub's Issues

Probable mixed units in stem diameter

The stem diameter data seems to sometimes be in units of meters and sometimes in units of centimeters. See the attached figure for the histogram of stem diameters for Betula nana. Many other species seem to have similar problems. For my current analysis, I am multiplying all diameters less than 0.05 by 100 under the assumption that the units were incorrectly labeled.
ttt_stemD.pdf

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