Topic: ome-zarr-converter Goto Github
Some thing interesting about ome-zarr-converter
Some thing interesting about ome-zarr-converter
ome-zarr-converter,nextflow DSL2 pipeline (leveraging ![bioformats2raw](https://github.com/glencoesoftware/bioformats2raw)/[raw2ometiff](https://github.com/glencoesoftware/raw2ometiff)) to convert almost any images to ome.tiff/ome.zarr
User: bioinfotongli
ome-zarr-converter,Command line tool to convert MCD files to Zarr
Organization: bodenmillergroup
ome-zarr-converter,Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
Organization: czbiohub-sf
Home Page: https://czbiohub-sf.github.io/iohub/
ome-zarr-converter,Run encapsulated docker containers with BioFormats2Raw in the Amazon Web Services infrastructure.
Organization: distributedscience
ome-zarr-converter,A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, in a parallelised manner.
Organization: euro-bioimaging
ome-zarr-converter,A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)
Organization: fmi-faim
ome-zarr-converter, Converter from the Lif files (Leica Microscope) to OME-Zarr format.
Organization: fractal-analytics-platform
ome-zarr-converter,A collection of fractal tasks to run plantseg workflows
Organization: fractal-analytics-platform
ome-zarr-converter,Main tasks for the Fractal analytics platform
Organization: fractal-analytics-platform
Home Page: https://fractal-analytics-platform.github.io/fractal-tasks-core/
ome-zarr-converter,Ome(ro) SLide Image Conversion and Compression pipline (OmeSliCC)
Organization: franciscrickinstitute
ome-zarr-converter,Bio-Formats image file format to raw format converter
Organization: glencoesoftware
ome-zarr-converter,ITK IO for images stored in OME-Zarr format.
Organization: insightsoftwareconsortium
ome-zarr-converter,Fractal tasks for the Opera/Operetta microscope and drug profiling
Organization: leukemia-kispi
Home Page: https://leukemia-kispi.github.io/operetta-compose/
ome-zarr-converter,Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data
Organization: ome
Home Page: https://pypi.org/project/ome2024-ngff-challenge/
ome-zarr-converter,
Organization: ome
Home Page: https://pypi.org/project/omero-cli-zarr/
ome-zarr-converter,ImageJ convenience layer for N5
Organization: saalfeldlab
ome-zarr-converter,Python API and CLI tools for working with WEBKNOSSOS datasets, annotations and server interactions. Includes converter to OME-Zarr.
Organization: scalableminds
Home Page: https://docs.webknossos.org/webknossos-py/index.html
ome-zarr-converter,Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.
Organization: spatial-image
ome-zarr-converter,A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.
User: thewtex
Home Page: https://ngff-zarr.readthedocs.io
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