This repository is a collection of python scripts that can be used to visualize data (Data exploration), check the image quality (ImageQuality), and to find the contours in a binary image (findContoursBinaryImage). The subprojects ImageQuality and findContourBinaryImage are in an alpha version and might not work properly. The Data exploration functions are ready to be used for data visualization.
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findContoursBinaryImage
Implement the following two calculations to identify the right spacing between objects:
- Spacing between primitives that build a feature
- Spacing between multiple features within on Image
createPCA
Function should be added to get the loading matrix (so we can identify the most relevant loadings)
createTSNE
perplexity is hard coded, no option to select the solver
createPCA
Different markers should be added to the 3D PCA plot
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