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thierrygosselin avatar thierrygosselin commented on June 16, 2024

@imaa9 using a tsv file to produce a VCF and/or GENIND file for adegenet won't work.
Try using the VCF file produced by the same stacks run and use that instead as input with the strata file. This will work to generate a genind file.

from radiator.

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