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In order to be used, FSL needs to be installed on your computer. Once you have installed it, update the file /UTILITY_GENERAL/SETTINGS/fsl_settings.txt writing your FSL installation path.
Default call:
emata(PET_dyn_path,t_PET_delta,out_path)
corresponds to
emata(PET_dyn_path, t_PET_delta, out_path, 'InputFun', 'IDIF', 'extractionSite', 'ICA', 'Feng', 1, 'Patlak', 1)
To extract IDIF from the CCA (when the FOV allows it…):
emata(PET_dyn_path, t_PET_delta, out_path,…,'extractionSite', 'CCA', …)
To perform Chen Correction with NLMEM:
emata(PET_dyn_path, t_PET_delta, out_path, 'Chen', 'NLMEM', covariates)
covariates = [Sex Height Weight Age Dose];
%Sex --> 1: female, 0: male
%Height [cm]
%Weight [Kg]
%Age [years]
%Dose[MBq]
Otherwise, if venous samples are available:
emata(PET_dyn_path, t_PET_delta, out_path, 'Chen', 'samples', venous_samples)
%venous_samples =
%--> venous_samples.c %[Bq/ml]
%--> venous_samples.t %[sec]
For disabling the motion correction step by adding the specific flag:
emata(...,'MoCo',0)