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Syksy avatar Syksy commented on July 30, 2024

TCGA had differing clinical features (such as ERG fusion statuses) available depending if the TCGA N=333 or the larger N=500ish subset was queried from cBio. These most important fields should now be combined from querying these two datasets and then combining them.

Basicly the difference you'd see when observing the columns at:
https://www.cbioportal.org/study/clinicalData?id=prad_tcga
and
https://www.cbioportal.org/study/clinicalData?id=prad_tcga_pub
... which now complement each other in version 0.7.6.

from curatedpcadata.

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