iLearn, a Python Toolkit and Web Server Integrating the Functionality of Feature Calculation, Extraction, Clustering, Feature Selection, Feature Normalization, Dimension Reduction and Model Construction for Classification, Best Model Selection, Ensemble Learning and Result Visualization for DNA, RNA and Protein Sequences.
Home Page: http://ilearn.erc.monash.edu/
Dear Superzchen,
The APAAC module fails when invoked from iLearn-protein-basic.py with a fasta file with peptides of length 13.
The problem I think is that the iLearn-protein-basic.py has a --format value 'tsv_1' that is missing in the APAAC module.
Also, In the iLearn-auto-pipline looks like it is possible to invoke the APAAC module with the param lambdaValue, but the APAAC has a --lamada parametr instead:
parser.add_argument("--lamada", type=int, default=30, help="the lamada value for SOCNumber descriptor")
cheers
Michele
Hi
I ran the iLearn codes (example data) it gave me the output but all the numbers are zero. I tried several times but all things goes well and just results are weird !!
Please let me know what is the problem.
Regards
I think it's a typo here:
Line 249 in ad8024a
Hello, I entered the FASTA sequence in the required format. However, this error is always displayed. What is the reason?
Looking forward to your answers。Thanks!
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