sumeetmankar171 Goto Github PK

r-for-geographic-data-science

R for Geographic Data Science

rectchr

Multi-level visualization of genomic statistical variables on rectangular chromosomes

reseqtools

A Toolkit for analyzing next-generation DNA Re-Sequencing data

rmejlbasbmp_2024

Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"

rmvp

:postbox: A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For Genome-Wide Association Study

rnabio.org

website for the rnaseq course

rsa-gui

User-controlled pipeline for analyzing plant root system architecture

seqspec

machine-readable file format for genomic library sequence and structure

shiny_popgen

Shiny apps for teaching Population Genetics

shinyml

shinyML is a R package that use h2o and Spark frameworks to easily compare supervised machine learning models on regression or classification tasks (published on CRAN in July 2019)

simpletidy_genecoex

A simple gene co-expression analyses workflow powered by tidyverse and graph analyses

sisg_mcmc_course

Lecture notes for Eric Anderson and Matthew Stephens SISG course on MCMC for Statistical Genetics

snp_plotter

snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.

soybean

Soybean project

starter-hugo-academic

statements

Successful Job Applications and Grants

sumeet_ngs_internship

nyberman_internship

sumeetmankar171.github.io

sumtool

:hammer: Tool for GWAS summary-level data analysis

sureshmurali.github.io

Personal Portfolio built using React

survey-monkey-tutorial

the-art-of-command-line

Master the command line, in one page

thealgorithms-python

TheAlgorithms/Python

training-modules

Materials for short, half-day workshops

treeviewer

Cross-platform software to draw phylogenetic trees

vcf2dis

VCF2Dis: A new simple and efficient software to calculate p-distance matrix based Variant Call Format

vcf2phylip

Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis

vcf_to_hapmap

Convert large gzipped VCF to double-bit HapMap format

wgcna_tutorial

A step-by-step tutorial for Weighted correlation network analysis (WGCNA)

workshops

Donald Danforth Plant Science Center Data Science workshops