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using a localperl installation to enable the mpi (default perl comes with pthread support which leads to errors maker is run with mpiexec)
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substitution of with default perl with loacalperl at the moment quick and dirty
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trf is provided ia this git because of problems whens loading the binary with wget
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use the image like this:
docker run -it -v $PWD:/media maker -CTL
creates the maker control fles in the current working directory
docker run -it -v $PWD:/media maker
starts the maker run when all three control files are located in the current working directory
paths to data files should start with /media because this is theworking directory in the docker image
docker run -it -v $PWD:/media mpiexec -n 24 --allow-run-as-root maker
runs maker with 24 cores and openmpi
using a hostfile that looks like this to define the number of available slots for openmpi
localhost slots=4
run it like this
docker run -it -v $PWD:/media mpiexec -n 24 --allow-run-as-root maker --hostfile hostfile
Stephan drukewitz --> [email protected]