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πŸ‘¨ Hi, I am Dongyue Yu. πŸ’» πŸ‘‹

Ph.d candiadate at NK(Nankai University)

  • πŸ”­ My current field of work involves various key areas such as multi-omics data engineering, software development, artificial intelligence, algorithm development, data visualization, and deep learning.
    • 🍡 Single-Cell/Nucleus Transcriptomics
    • 🍡 Chromatin Accessibility Mapping
    • 🍡 Spatial Transcriptomics
    • β˜• Silico Gene Perturbation/Treatment Analysis
    • β˜• Domain Adaptation
    • β˜• Representation Learning
    • β˜• Transfer Learning
    • 🍸 Python and R Package Development
    • 🍹 Data analysis and visualization software development
  • 🌱 I am currently immersed in studying programming languages such as R, Linux, Python, JavaοΌ›
  • 🌱 Build software frameworks using Electron, and implement software visualization with CSS/HTML/D3.js/Shaders/P5.js/Three.js, etc.
  • 🌱 In addition, I am deeply exploring mathematical algorithms in the field of deep learning, biotechnology engineering, and visual development of data mining tools.
  • πŸ˜„ I’m looking forward to developing some R/Python packgaes for visualization.

i am also an open-source enthusiast and maintainer. i learned a lot from the open-source community and i love how collaboration and knowledge sharing happened through open-source.

Software

R packages

Python packages

Quarto book

Ask me about anything, I am happy to help.

πŸ“« How to reach me:

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πŸ‘― Searching developer：

  • algorithm developers
  • software developers
  • data visualization developers
  • data mining collaborators

my github stats πŸ‘‹

Yu Dongyue's Projects

haplot icon haplot

An easy-to-use python package can be used for genomic visual analysis

metatrx icon metatrx

MetaTrx: Comprehensive Cross-Species Transcriptome Analysis

transpropy icon transpropy

A python package that integrate algorithms and various machine learning approaches to extract features (genes) effective for classification and attribute them accordingly.

transpropybook icon transpropybook

TransProPy is a Python package that is part of the TransPro series under the SuperOmics framework.

transpror icon transpror

Analysis and visualization of multi-omics data. In ongoing development: multi-modal fusion, sparse learning, and spatio-temporal effects...

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