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biosak's Introduction

BioSAK (A Swiss-Army-Knife for Bioinformaticians)

pypi licence pypi version DOI

Contact

Shan Zhang1,2 and Weizhi Song1,2

1 Center for Marine Science & Innovation, University of New South Wales, Sydney, Australia

2 Department of Ocean Science, Hong Kong University of Science and Technology, Hong Kong

E-mail: [email protected] and [email protected]

Installation

  • BioSAK has been tested on Linux/Mac, but NOT yet on Windows.

  • BioSAK is implemented in python3, you can

    • install it with pip3 install BioSAK

    • upgrade it with pip3 install --upgrade BioSAK

  • If you are an UNSW Katana user, this might be helpful.

BioSAK modules

Getting help

  • You can get example commands for most of the modules by typing, for example, BioSAK iTOL -h.

  • Please refer to the documentation page for help (in preparation, very messy).

  • A license statement is here.

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