0.388 ===========================================================================
0.388 Feature : R packages (via pak)
0.388 Description : Installs R packages via the pak R package's function. R must be already installed.
0.389 Id : ghcr.io/rocker-org/devcontainer-features/r-packages
0.389 Version : 1.0.4
0.389 Documentation : https://github.com/rocker-org/devcontainer-features/tree/main/src/r-packages
0.389 Options :
0.389 PACKAGES="easystats"
0.389 PAKVERSION="auto"
0.389 ADDITIONALREPOSITORIES=""
0.389 INSTALLSYSTEMREQUIREMENTS="true"
0.389 NOTCRAN="false"
0.389 ===========================================================================
0.569 Install R packages...
0.595 /tmp/r-packages /tmp/dev-container-features/r-packages_14
1.710 pak is already installed. Skip pak installation...
1.712 Set 'CI' to 'true'...
1.755 find: '/var/lib/apt/lists/*': No such file or directory
1.761 Running apt-get update...
2.863 Get:1 http://archive.ubuntu.com/ubuntu jammy InRelease [270 kB]
2.973 Get:2 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ InRelease [3626 B]
3.038 Get:3 http://security.ubuntu.com/ubuntu jammy-security InRelease [110 kB]
3.038 Get:4 https://packages.microsoft.com/repos/azure-cli jammy InRelease [3595 B]
3.226 Get:5 https://dl.yarnpkg.com/debian stable InRelease [17.1 kB]
3.297 Get:6 http://archive.ubuntu.com/ubuntu jammy-updates InRelease [119 kB]
3.335 Get:7 https://packages.cloud.google.com/apt cloud-sdk InRelease [6361 B]
3.412 Get:8 http://archive.ubuntu.com/ubuntu jammy-backports InRelease [109 kB]
3.580 Ign:9 https://r2u.stat.illinois.edu/ubuntu jammy InRelease
3.824 Get:10 https://r2u.stat.illinois.edu/ubuntu jammy Release [5713 B]
4.066 Get:11 https://r2u.stat.illinois.edu/ubuntu jammy Release.gpg [793 B]
4.802 Get:12 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages [48.6 kB]
5.528 Get:13 https://packages.microsoft.com/repos/azure-cli jammy/main all Packages [1099 B]
5.654 Get:14 https://packages.microsoft.com/repos/azure-cli jammy/main amd64 Packages [1367 B]
7.228 Get:15 http://archive.ubuntu.com/ubuntu jammy/multiverse amd64 Packages [266 kB]
7.801 Get:16 https://dl.yarnpkg.com/debian stable/main amd64 Packages [11.1 kB]
8.002 Get:17 https://dl.yarnpkg.com/debian stable/main all Packages [11.1 kB]
8.201 Get:18 http://archive.ubuntu.com/ubuntu jammy/restricted amd64 Packages [164 kB]
8.449 Get:19 http://archive.ubuntu.com/ubuntu jammy/universe amd64 Packages [17.5 MB]
10.94 Get:20 https://packages.cloud.google.com/apt cloud-sdk/main amd64 Packages [609 kB]
15.14 Get:21 http://security.ubuntu.com/ubuntu jammy-security/main amd64 Packages [1514 kB]
17.89 Get:22 https://r2u.stat.illinois.edu/ubuntu jammy/main all Packages [7860 kB]
18.22 Get:23 http://security.ubuntu.com/ubuntu jammy-security/universe amd64 Packages [1074 kB]
19.81 Get:24 http://security.ubuntu.com/ubuntu jammy-security/multiverse amd64 Packages [44.6 kB]
20.56 Get:25 http://security.ubuntu.com/ubuntu jammy-security/restricted amd64 Packages [1889 kB]
27.70 Get:26 https://r2u.stat.illinois.edu/ubuntu jammy/main amd64 Packages [2468 kB]
31.49 Get:27 http://archive.ubuntu.com/ubuntu jammy/main amd64 Packages [1792 kB]
33.37 Get:28 http://archive.ubuntu.com/ubuntu jammy-updates/universe amd64 Packages [1346 kB]
33.85 Get:29 http://archive.ubuntu.com/ubuntu jammy-updates/restricted amd64 Packages [1927 kB]
34.75 Get:30 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 Packages [1796 kB]
35.59 Get:31 http://archive.ubuntu.com/ubuntu jammy-updates/multiverse amd64 Packages [50.4 kB]
35.75 Get:32 http://archive.ubuntu.com/ubuntu jammy-backports/universe amd64 Packages [28.1 kB]
36.06 Get:33 http://archive.ubuntu.com/ubuntu jammy-backports/main amd64 Packages [50.4 kB]
36.20 Fetched 41.1 MB in 34s (1204 kB/s)
36.20 Reading package lists...
86.39 > pak::repo_add(); pak::pak(trimws(unlist(strsplit('easystats', ',')))); pak::cache_clean()
88.48
91.54 v Updated metadata database: 2.89 MB in 8 files.
91.54
91.54 i Updating metadata database
97.90 v Updating metadata database ... done
97.91
98.81
98.82 > Will install 38 packages.
98.84 > Will download 38 CRAN packages (33.95 MB).
98.85 + MASS 7.3-60.0.1 [bld][cmp][dl] (561.61 kB)
98.85 + Matrix 1.6-5 [bld][cmp][dl] (2.88 MB)
98.85 + RColorBrewer 1.1-3 [bld][dl] (11.64 kB)
98.85 + bayestestR 0.13.2 [bld][dl] (408.56 kB)
98.85 + cli 3.6.2 [bld][cmp][dl] (569.77 kB)
98.85 + colorspace 2.1-0 [bld][cmp][dl] (2.12 MB)
98.85 + correlation 0.8.4 [bld][dl] (1.09 MB)
98.85 + datawizard 0.9.1 [bld][dl] (538.71 kB)
98.85 + easystats 0.7.0 [bld][dl] (1.75 MB)
98.85 + effectsize 0.8.6 [bld][dl] (344.84 kB)
98.85 + fansi 1.0.6 [bld][cmp][dl] (482.48 kB)
98.85 + farver 2.1.1 [bld][cmp][dl] (1.27 MB)
98.85 + ggplot2 3.5.0 [bld][dl] (3.56 MB)
98.85 + glue 1.7.0 [bld][cmp][dl] (105.42 kB)
98.85 + gtable 0.3.4 [bld][dl] (130.10 kB)
98.85 + insight 0.19.8 [bld][dl] (944.21 kB)
98.85 + isoband 0.2.7 [bld][cmp][dl] (1.59 MB)
98.85 + labeling 0.4.3 [bld][dl] (10.17 kB)
98.85 + lattice 0.22-5 [bld][cmp][dl] (599.04 kB)
98.85 + lifecycle 1.0.4 [bld][dl] (107.66 kB)
98.85 + magrittr 2.0.3 [bld][cmp][dl] (267.07 kB)
98.85 + mgcv 1.9-1 [bld][cmp][dl] (1.08 MB)
98.85 + modelbased 0.8.7 [bld][dl] (2.66 MB)
98.85 + munsell 0.5.0 [bld][dl] (182.65 kB)
98.85 + nlme 3.1-164 [bld][cmp][dl] (836.83 kB)
98.85 + parameters 0.21.5 [bld][dl] (674.14 kB)
98.85 + performance 0.10.9 [bld][dl] (2.49 MB)
98.85 + pillar 1.9.0 [bld][dl] (444.53 kB)
98.85 + pkgconfig 2.0.3 [bld][dl] (6.08 kB)
98.85 + report 0.5.8 [bld][dl] (1.88 MB)
98.85 + rlang 1.1.3 [bld][cmp][dl] (763.76 kB)
98.85 + scales 1.3.0 [bld][cmp][dl] (302.54 kB)
98.85 + see 0.8.2 [bld][dl] (123.33 kB)
98.85 + tibble 3.2.1 [bld][cmp][dl] (565.98 kB)
98.85 + utf8 1.2.4 [bld][cmp][dl] (241.08 kB)
98.85 + vctrs 0.6.5 [bld][cmp][dl] (969.07 kB)
98.85 + viridisLite 0.4.2 [bld][dl] (1.27 MB)
98.85 + withr 3.0.0 [bld][dl] (107.68 kB)
98.86
98.97 i Getting 38 pkgs (33.95 MB)
100.7 v Got cli 3.6.2 (source) (569.77 kB)
101.0 v Got bayestestR 0.13.2 (source) (408.56 kB)
101.4 v Got effectsize 0.8.6 (source) (344.84 kB)
101.5 v Got glue 1.7.0 (source) (105.42 kB)
102.0 v Got gtable 0.3.4 (source) (130.10 kB)
102.2 v Got fansi 1.0.6 (source) (482.48 kB)
102.7 v Got colorspace 2.1-0 (source) (2.12 MB)
102.8 v Got labeling 0.4.3 (source) (10.17 kB)
102.9 v Got farver 2.1.1 (source) (1.27 MB)
103.3 v Got insight 0.19.8 (source) (944.21 kB)
104.3 v Got lattice 0.22-5 (source) (599.04 kB)
104.4 v Got munsell 0.5.0 (source) (182.65 kB)
105.6 v Got ggplot2 3.5.0 (source) (3.56 MB)
105.9 v Got isoband 0.2.7 (source) (1.59 MB)
106.0 v Got nlme 3.1-164 (source) (836.83 kB)
107.0 v Got modelbased 0.8.7 (source) (2.66 MB)
107.1 v Got magrittr 2.0.3 (source) (267.07 kB)
107.3 v Got RColorBrewer 1.1-3 (source) (11.64 kB)
107.4 v Got pillar 1.9.0 (source) (444.53 kB)
108.1 v Got see 0.8.2 (source) (123.33 kB)
108.4 v Got parameters 0.21.5 (source) (674.14 kB)
108.4 v Got utf8 1.2.4 (source) (241.08 kB)
108.5 v Got mgcv 1.9-1 (source) (1.08 MB)
108.6 v Got rlang 1.1.3 (source) (763.76 kB)
108.8 v Got pkgconfig 2.0.3 (source) (6.08 kB)
109.8 v Got scales 1.3.0 (source) (302.54 kB)
109.9 v Got MASS 7.3-60.0.1 (source) (561.61 kB)
110.2 v Got viridisLite 0.4.2 (source) (1.27 MB)
110.9 v Got easystats 0.7.0 (source) (1.75 MB)
111.1 v Got datawizard 0.9.1 (source) (538.71 kB)
111.2 v Got vctrs 0.6.5 (source) (969.07 kB)
111.4 v Got correlation 0.8.4 (source) (1.09 MB)
111.5 v Got lifecycle 1.0.4 (source) (107.66 kB)
111.7 v Got tibble 3.2.1 (source) (565.98 kB)
112.2 v Got withr 3.0.0 (source) (107.68 kB)
112.3 v Got Matrix 1.6-5 (source) (2.88 MB)
113.1 v Got performance 0.10.9 (source) (2.49 MB)
113.9 v Got report 0.5.8 (source) (1.88 MB)
114.2 i Building cli 3.6.2
116.5 i Building colorspace 2.1-0
116.8 i Building fansi 1.0.6
117.0 i Building farver 2.1.1
117.1 i Building glue 1.7.0
117.3 i Building insight 0.19.8
118.2 i Building isoband 0.2.7
118.7 i Building labeling 0.4.3
131.0 v Built labeling 0.4.3 (12.1s)
131.1 i Building lattice 0.22-5
145.1 v Built glue 1.7.0 (27.4s)
145.1 i Building magrittr 2.0.3
163.9 v Built colorspace 2.1-0 (46.4s)
164.0 i Building MASS 7.3-60.0.1
166.9 v Built magrittr 2.0.3 (21.1s)
167.0 i Building pkgconfig 2.0.3
174.1 v Built isoband 0.2.7 (55.3s)
174.2 i Building RColorBrewer 1.1-3
178.7 v Built pkgconfig 2.0.3 (11.3s)
178.8 i Building rlang 1.1.3
187.7 v Built RColorBrewer 1.1-3 (13.1s)
187.7 i Building utf8 1.2.4
189.4 v Built fansi 1.0.6 (1m 12.3s)
189.5 i Building viridisLite 0.4.2
192.4 v Built lattice 0.22-5 (1m 0.7s)
192.5 i Building withr 3.0.0
195.1 v Built insight 0.19.8 (1m 16.8s)
200.7 Error:
200.7 ! error in pak subprocess
200.7 Caused by error in `verify_extracted_package(filename, pkg_cache)`:
200.7 !
200.7 '/tmp/Rtmp1ZXPyW/file98249036931/colorspace_2.1-0_R_x86_64-pc-linux-gnu.tar.gz'
200.7 is not a valid R package, it is an empty archive.
200.7 ---
200.7 Backtrace:
200.7 1. pak::pak(trimws(unlist(strsplit("easystats", ","))))
200.7 2. pak::pkg_install(pkg, ...)
200.7 3. pak:::remote(function(...) get("pkg_install_do_plan", asNamespace("pak"))(...)...
200.7 4. err$throw(res$error)
200.7 ---
200.7 Subprocess backtrace:
200.7 1. base::withCallingHandlers(cli_message = function(msg) { ...
200.7 2. get("pkg_install_do_plan", asNamespace("pak"))(...)
200.7 3. proposal$install()
200.7 4. pkgdepends::install_package_plan(plan, lib = private$library, num_workers = nw, ...
200.7 5. base::withCallingHandlers({ ...
200.7 6. pkgdepends:::handle_events(state, events)
200.7 7. pkgdepends:::handle_event(state, i)
200.7 8. proc$get_result()
200.7 9. processx:::process_get_result(self, private)
200.7 10. private$post_process()
200.7 11. pkgdepends:::install_extracted_binary(filename, lib_cache, pkg_cache, lib, ...
200.7 12. pkgdepends:::verify_extracted_package(filename, pkg_cache)
200.7 13. base::throw(pkg_error("{.path {filename}} is not a valid R package, it is an e...
200.7 14. | base::signalCondition(cond)
200.7 15. global (function (e) ...
200.7 Execution halted
200.9 ERROR: Feature "R packages (via pak)" (ghcr.io/rocker-org/devcontainer-features/r-packages) failed to install! Look at the documentation at https://github.com/rocker-org/devcontainer-features/tree/main/src/r-packages for help troubleshooting this error.