cath-structural-cluster-example's People
cath-structural-cluster-example's Issues
Add names to structural clusters
e.g. <superfamily name>
structural cluster 1
Filter members of structural clusters to a maximum of 1000
...using the same filtering criteria as funfams
lower case every residue that is not aligned to positions in structural alignment
If a residue from the FunFam alignment is not aligned to a residue in the structural alignment then it should be lower case - keep all residues that are equivalent to those in the structural alignment as upper case.
Might need some post processing of MAFFT output.
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