Code Monkey home page Code Monkey logo

silk1100 / behavioralproject Goto Github PK

View Code? Open in Web Editor NEW
3.0 3.0 0.0 46.93 MB

Classify TD vs ASD according to SRS behavioral report severity score. ABIDE II data set is utilized for training and testing. Freesurfer v6 is utilized for sMRI volumes preprocessing and features extraction.

Python 3.22% Jupyter Notebook 96.56% Shell 0.22%
autism-spectrum-disorder machine-learning data-analysis neuroimaging visualization feature-selection feature-engineering

behavioralproject's Introduction

*** Structure

** Core/Motors/Algorithms/Models
	* Experiment (main_experiments.py): The main class that combines all other modules, classes, and functions to build an experiment.
	* DataDivisor (DataDivisor.py): The data handler class. It reads the data directory input as specified in constants.py, and outputs
	* FeatureSelector (FeatureSelection.py): Based upon recursive feature elimination using cross-validation algorithm. This class initialize and train various classifiers that supports feature_importance_ or feature_coef_
	* CustomClassifier (CLassifiers.py): The machine learning classifiers bag that initialize and train different machine learning classifiers
** Configuration/Variablenames/Directories
	* constansts.py: It contains all the keywords used to refer to each attribute in the behavioral report.
			 Contains the keywords used to refer to available classifiers for both ML and feature selection.
			 Contains all directories utilized in saving

** Utility functions
	* utils.py: Contains the functions used to give a time stamp for each result folder created. COntain the functions that is used for saving different FS and ML models.

** Starting point:
	* main.py: It contains only 1 line of code and a dictionary contains all the required experiment attributes.
		   Experimental attributes can be found in experiment_designer.py.


behavioralproject's People

Stargazers

 avatar  avatar  avatar

Watchers

 avatar  avatar  avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.