Comments (2)
I second this request.
I think you only need to upload your docker image to docker hub then we can use singularity.
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I agree that most people who run a cluster without root would prefer to use singularity, or could we install it directly without using Docker or singularity, since DeepVariant can also be installed from source code.
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Related Issues (20)
- what's the recommended memory to run DipAsm? HOT 1
- permission denied of installment HOT 2
- Can Dipasm be used for plant genomes? HOT 2
- DipAsm HOT 1
- error: ".FALSE" ? HOT 10
- Fast and accurate chromosome-scale phased assembly HOT 7
- gzip: stdout: Broken pipe HOT 1
- The result of the run is returned, but "scaffold_connection.txt" is 0 in the result file HOT 2
- divergent genome size between two haplotypes after using pstools HOT 1
- memory: core dumped at haplotype_scaffold HOT 6
- Pstools pre_hap1 or pre_hap2 HOT 5
- Scaffolded by 3D-DNA or HiRise in unphased assembly
- It is hard for me to install through your instruction HOT 1
- Quality control for hifi and hic data HOT 1
- pstools_1 "Segmentation fault (core dumped)"
- install problem
- Applying to contigs or chromosome-level scaffolds
- CommandNotFoundError HOT 2
- DipAsm pipeline
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