shamir-lab Goto Github PK
Name: Ron Shamir's Lab
Type: Organization
Name: Ron Shamir's Lab
Type: Organization
This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, and Ron Shamir
SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-021-01068-z
An ILP algorithm for sorting cancer karyotypes. "Sorting cancer karyotypes using double-cut-and-joins, duplications and deletions", R. Zeira and R. Shamir, Bioinformatics, bty381, 2018. https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/bty381/4992148
This R code reproduces the results presented in: "Personalized prediction of adverse heart and kidney events using pre-enrollment and time course data from SPRINT and ACCORD trials"
Maintain GitHub Stats for More than 14 Days
Implementations of syncmer-based long read mappers
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