Would it be possible to provide bins and start from the middle of mmlong2 pipeline? about mmlong2 HOT 3 CLOSED

Hello, this is possible by creating some mock files and then touching them with Snakemake, although it would require some more advanced Snakemake usage.

An upcoming updated version of the pipeline will make this way easier.

from mmlong2.

Hello, this is possible by creating some mock files and then touching them with Snakemake, although it would require some more advanced Snakemake usage.

An upcoming updated version of the pipeline will make this way easier.

Thanks a lot for your kind reply. Would it be possible to use these mock files in advance, as we are waiting for such analysis ? And when the updated version of mmlong2 will be released?

from mmlong2.

Hello again, the new version is in active development right now and so it is difficult to provide and ETA at the moment.

For analyzing MAGs obtained from different tools, it might make more sense to use other, more established workflows.

from mmlong2.