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serka-m's Projects

bakta icon bakta

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

cable-bacteria-mags icon cable-bacteria-mags

Repository for scripts and resources used for recovery of Cable Bacteria MAGs from sequenced samples

digester-multisequencing icon digester-multisequencing

Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing

enadumper icon enadumper

Workflow for high-throughput upload of sequencing data to the European Nucleotide Archive

mmlong2 icon mmlong2

Bioinformatics pipeline for recovery and analysis of metagenome-assembled genomes

mmlong2-lite icon mmlong2-lite

Lightweight bioinformatics pipeline for microbial genome recovery

nanoq icon nanoq

Minimal but speedy quality control for nanopore reads in Rust :bear:

optimal-ph icon optimal-ph

Repository for the Copenhagen Biohackathon 2021 challenge of Predicting Optimal pH for Enzyme Activity. Team N-SVAMT.

serka-m icon serka-m

Config files for my GitHub profile.

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