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deep_learning_examples

Examples of using deep learning in Bioinformatics

deep_learning_genomics_nlp

Final project for CS224d

deep_learning_notes

a collection of my notes on deep learning

deepmicrobes

DeepMicrobes: taxonomic classification for metagenomics with deep learning

deepomics

deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis

deepseqanalysis

Course materials for a graduate class in applied bioinformatics for biologists

deepshape

RNA Structural Probing Data Predicting and Structural Motif Finding using Deep Learning

dge_workshop

dge_workshop_salmon

dge_workshop_salmon_online

dib-training

Web site for Data Intensive Training at UC Davis

dms_variants

Analyze deep mutational scanning of barcoded variants.

dnabinding

DNA binding protein prediction work (improvement attempt over iDNAProt-ES

ecol596

enar_2019_tutorial

A Primer on Python for Statistical Programming and Data Science

epi_2021

Epigenomics alanysis workshop 2021

europython-2016

My talk at EuroPython 2016

exercises

faster

Fast Lane to Learning R!

full_spectrum_bioinformatics

An open-access bioinformatics text

gatk-for-microbes

gen242

Class: Data Analysis in Genome Biology

generative_examples

Some illustrations of algorithmic art made with #rstats

genomic-ulmfit

ULMFiT for Genomic Sequence Data

genomic_utilities

genomic_visualization_2018

genomicscourse

For QMUL's Genome Bioinformatics MSc module BIO721P & SIB's Spring school in bioinfo & population genomics

getting-started-with-genomics-tools-and-resources

Unix, R and python tools for genomics and data science

getting_started_with_git

Learning Git

getting_started_with_latex

Getting started with LaTeX