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10k_genomes

Various scripts for efficient processing of 10k Salmonella genomes

2015lab1

2019-snakemake-harvard-informatics-nanocourse

Intro to workflows for efficient automated data analysis, using snakemake.

2020-cs109a

2020-genome_assembly_workshop

Explore the world of genome assembly and gain an understanding of the power and pitfalls of sequencing technologies and assembly techniques.

2020_group07

An exploratory proteome analysis of breast cancer proteomes dataset as part of the DTU 22100 "R for Data Science" course.

2022-nov-introduction-to-python-for-bioinformatics

This workshop consists of five half-day sessions, combining lecture and exercises to teach you the basics of programming (using python), with an emphasis on bioinformatics. Completion of this material will allow participants to get the most out of our other experiment-centric workshops. No previous python experience is necessary.

a-2017

Public Repository for cs109a, 2017 edition

aima-python

Python implementation of algorithms from Russell And Norvig's "Artificial Intelligence - A Modern Approach"

alfpy

http://www.combio.pl/alfree

amazing-python-scripts

🚀 Curated collection of Amazing Python scripts from Basics to Advance with automation task scripts.

apm_exercises

Exercises for the book Applied Predictive Modeling by Kuhn and Johnson (2013)

appliedgenomics2018

Materials for Spring 2018 Applied Genomics Course

ashg-workshop-2021

assorted-computational-genomics-data-visualizations

Biplots, Volcano plots, PCA plots, Heatmaps and more Computational Genomics data created and visualized during University of Pittsburgh course, Computational Biology (BIOSC1540), with Dr. Miler Lee

aur_2021

AUR 2021

awesome-bioinformatics

A curated list of awesome Bioinformatics libraries and software.

awesome-cheatsheets

👩‍💻👨‍💻 Awesome cheatsheets for popular programming languages, frameworks and development tools. They include everything you should know in one single file.

awesome-courses

:books: List of awesome university courses for learning Computer Science!

awesome-datascience

:memo: An awesome Data Science repository to learn and apply for real world problems.

awesome-deep-learning-resources

Rough list of my favorite deep learning resources, useful for revisiting topics or for reference. I have got through all of the content listed there, carefully. - Guillaume Chevalier

awesome-deepbio

A curated list of awesome deep learning applications in the field of computational biology

awesome-microbes

List of computational resources for analyzing microbial sequencing data.

awesome-python-books

:books: Directory of Python books

awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

bacterial-genomics-tutorial

bacterial_wgs_training

In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.

bash-oneliner

A collection of handy Bash One-Liners and terminal tricks for data processing and Linux system maintenance.

bash_bioinformatic_scripts

Bash shell scripts related to bioinformatic analyses

bayes_computing_course