Comments (2)
Hi @davisidarta,
There currently isn't support in RunVelocity
to use only a subset of the cells. We suggest that after integration, then subset the integrated object back to the original cells that velocity was calculated for
subset.object <- integrated.object[, colnames(velocyto.object)]
from seurat-wrappers.
Similar question, Is it possible to use RunALRA(object, split.by="Treatment")
to have ALRA reduce the treatment bias?
from seurat-wrappers.
Related Issues (20)
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