Whenever I try to run PyPREP I get the following output which seems promising, however it stalls here and continues to act as if it is running and no other output comes out. Any assistance would be greatly appreciated. (Also I tried running this on both the present master version v20, and also the development version and the same results occur in each one.)
Extracting EDF parameters from /content/drive/My Drive/Colab Notebooks/Jacob5MeO2min.edf...
EDF file detected
Setting channel info structure...
Creating raw.info structure...
Reading 0 ... 200499 = 0.000 ... 801.996 secs...
<Info | 7 non-empty values
bads: []
ch_names: fp1, fp2, f3, f4, c3, c4, p3, p4, o1, o2, f7, f8, t3, t4, t5, ...
chs: 19 EEG
custom_ref_applied: False
highpass: 0.0 Hz
lowpass: 128.0 Hz
meas_date: unspecified
nchan: 19
projs: []
sfreq: 256.0 Hz
>
[<DigPoint | LPA : (-82.5, -0.0, 0.0) mm : head frame>, <DigPoint | Nasion : (0.0, 102.7, 0.0) mm : head frame>, <DigPoint | RPA : (82.2, 0.0, 0.0) mm : head frame>, <DigPoint | EEG #1 : (-28.2, 102.3, 31.7) mm : head frame>, <DigPoint | EEG #3 : (28.6, 103.2, 31.6) mm : head frame>, <DigPoint | EEG #16 : (-67.4, 62.3, 30.5) mm : head frame>, <DigPoint | EEG #18 : (-48.2, 76.3, 80.9) mm : head frame>, <DigPoint | EEG #20 : (0.3, 83.3, 103.8) mm : head frame>, <DigPoint | EEG #22 : (49.7, 77.4, 79.6) mm : head frame>, <DigPoint | EEG #24 : (70.0, 64.2, 29.8) mm : head frame>, <DigPoint | EEG #40 : (-62.7, 16.1, 106.8) mm : head frame>, <DigPoint | EEG #42 : (0.4, 21.0, 140.9) mm : head frame>, <DigPoint | EEG #44 : (64.3, 16.7, 106.0) mm : head frame>, <DigPoint | EEG #62 : (-50.8, -48.7, 103.6) mm : head frame>, <DigPoint | EEG #64 : (0.3, -49.0, 129.2) mm : head frame>, <DigPoint | EEG #66 : (53.3, -48.5, 104.2) mm : head frame>, <DigPoint | EEG #81 : (-28.2, -84.3, 61.0) mm : head frame>, <DigPoint | EEG #83 : (28.6, -84.0, 60.9) mm : head frame>, <DigPoint | EEG #87 : (-80.7, 6.6, 36.6) mm : head frame>, <DigPoint | EEG #88 : (-69.4, -47.8, 47.3) mm : head frame>, <DigPoint | EEG #89 : (81.5, 7.5, 36.5) mm : head frame>, <DigPoint | EEG #90 : (70.0, -47.4, 47.3) mm : head frame>]
[ 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18]
['fp1', 'fp2', 'f3', 'f4', 'c3', 'c4', 'p3', 'p4', 'o1', 'o2', 'f7', 'f8', 't3', 't4', 't5', 't6', 'fz', 'cz', 'pz']
Setting up high-pass filter at 1 Hz
FIR filter parameters
---------------------
Designing a one-pass, zero-phase, non-causal highpass filter:
- Windowed time-domain design (firwin) method
- Hamming window with 0.0194 passband ripple and 53 dB stopband attenuation
- Lower passband edge: 1.00
- Lower transition bandwidth: 1.00 Hz (-6 dB cutoff frequency: 0.50 Hz)
- Filter length: 845 samples (3.301 sec)
<ipython-input-15-246072ead167>:34: DeprecationWarning: Using ``raise_if_subset`` to ``set_montage`` is deprecated and ``set_dig`` will be removed in 0.21
raw.set_montage(montage, match_case=False, raise_if_subset=False)
Setting up high-pass filter at 1 Hz
FIR filter parameters
---------------------
Designing a one-pass, zero-phase, non-causal highpass filter:
- Windowed time-domain design (firwin) method
- Hamming window with 0.0194 passband ripple and 53 dB stopband attenuation
- Lower passband edge: 1.00
- Lower transition bandwidth: 1.00 Hz (-6 dB cutoff frequency: 0.50 Hz)
- Filter length: 845 samples (3.301 sec)