rremelgado / cawar Goto Github PK
View Code? Open in Web Editor NEWR package to support land cover classification and water management in the Central Asia Basin (SAB)
R package to support land cover classification and water management in the Central Asia Basin (SAB)
Running revdep checks for current rgdal on R-Forge - see:
https://stat.ethz.ch/pipermail/r-sig-geo/2019-November/027801.html
shows the errors in the check log below, related to use of PROJ&/GDAL3
and required changes to sp and rgdal. If useful find a regerence to a docker
image in this thread:
Changes will occur quite fast, and packages need to be prepared.
* using log directory ‘/home/rsb/topics/packages/rgdal/deps_ng/CAWaR.Rcheck’
* using R version 3.6.1 (2019-07-05)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* checking for file ‘CAWaR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘CAWaR’ version ‘0.0.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘CAWaR’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘grDevices’ ‘rgdal’ ‘spatialEco’
All declared Imports should be used.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... ERROR
Running examples in ‘CAWaR-Ex.R’ failed
The error most likely occurred in:
> ### Name: extractTS
> ### Title: extractTS
> ### Aliases: extractTS
>
> ### ** Examples
>
> {
+
+ require(raster)
+ require(fieldRS)
+
+ # read raster data
+ r <- brick(system.file("extdata", "ndvi.tif", package="fieldRS"))
+
+ # read field data
+ data(fieldData)
+
+ extractTS(fieldData[1:5,], r)
+
+ }
Loading required package: raster
Loading required package: sp
Loading required package: fieldRS
Error in extractTS(fieldData[1:5, ], r) :
"x" and "y" have different projections
Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘CAWaR.Rmd’using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 ERROR, 1 NOTE
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