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TargetMine

TargetMine is an integrated data warehouse system for target discovery which is based on the InterMine framework with a few customized features.

Web site: https://targetmine.mizuguchilab.org/

Dependencies

InterMine 3.0 or above.

If you are looking for TargetMine whihch base on "Pre-InterMine 2.0", please see https://github.com/chenyian-nibio/targetmine.

InterMine

A powerful open source data warehouse system. InterMine allows users to integrate diverse data sources with a minimum of effort, providing powerful web-services and an elegant web-application with minimal configuration. For other information, please refer to https://github.com/intermine/intermine.

Installation

Please refer to the documentation in InterMine Documentation.

Some instructions will be added here latter.

Copyright and License

Copyright (C) 2011-2019 by The Mizuguchi Laboratory.

TargetMine is licensed under the MIT License.

See LICENSE for licensing information.

Please cite

An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework.
Chen Y-A, Tripathi LP, Mizuguchi K.
Database (Oxford). 2016 Mar 17;2016. pii: baw009
doi pubmed

TargetMine, an Integrated Data Warehouse for Candidate Gene Prioritisation and Target Discovery.
Chen Y-A, Tripathi LP, Mizuguchi K.
PLoS ONE. 2011 Mar 8;6(3): e17844
doi pubmed

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