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Official home of genome aligner based upon notion of Cactus graphs
Determines how well-connected a .hal cactus graph file is by measuring how many bases are involved in alignments between each assembly in the graph.
A generic library for simulating networks of ordinary and delay differential equations for systems modeling
Precision pangenomics (review article on graph genomics)
Finds and annotates putative kinase consensus sites in yeast proteins.
Plotting was originally built for comparing cactus and dipcall alignments between the reference and a set of given assemblies. Edit and run plot_alignment_depth.py to make plots.
All of my projects created in Python
Faster than an all-to-all alignment for constructing cactus graphs. Starts by aligning all sequences to the reference. All the sequences that align poorly (or not at all) to the reference are then re-aligned to all the non-reference sequence.
Various scripts used during the construction and analysis of the vg normalize command.
tools for working with genome variation graphs
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.