Code Monkey home page Code Monkey logo

patient-seed-generator's Introduction

patient-seed-generator

Generates fake patient and health data into a graph model for testing big data pipelines and analytics functionality

Project Structure

./seed

  • Raw data inputs

./seed2json.py

  • Builds json entities and edges
  • Warning - running this script will delete existing output directory

./output

  • Contains files of json commands for depositing generated health info to a graph database
  • This is wiped on each run of ./seed2json.py
  • This is checked in to save generation time

Entity models

The seed2json.py generates a simplified data model for testing...

alt text

Currently generating: { "num_clearing_houses": 1000, "num_doctors": 500, "num_edges": 43550, "num_encounters": 10000, "num_entities": 32707, "num_facilities": 1000, "num_insurance_providers": 45, "num_lab_results": 5137, "num_labs": 25, "num_patients": 10000, "num_research_orgs": 1000, "num_researchers": 2000 }

Neo4j setup

Setup neo4j and python connectivity

Seed Neo4j

...

patient-seed-generator's People

Contributors

robertjchristian avatar

Stargazers

 avatar

Watchers

James Cloos avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.