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nbbinder's Introduction

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Hi, there, welcome to my github page!

I am a Mathematician, working at the Universidade Federal do Rio de Janeiro, Brazil, with a PhD degree in Applied Mathematics from the Indiana University, from 1996. I have a diverse range of interest in Mathematics, both pure and applied, with most of the topics involving some sort of differential equation, with past and present projects in the Oil & Field industry and with financial organizations. I have a number of publications totaling 1000+ citations, including the book Navier-Stokes Equations and Turbulence, co-authored with Ciprian Foias, Oscar P. Manley, and Roger Temam.

In education, I like making most of my textbooks freely available, although mostly in Portuguese. Here are some: Random notes (Bayesian probabilistic programing), Equações diferenciais (pdf), Modelagem Matemática, Aspectos teóricos e numéricos de equações diferenciais estocásticas (SDE) e aleatórias (RODE), Tutorial Flux.

Lately I have been enjoying doing numerics and coding in the Julia language. I've been helping the Julia community with discussions, issues and PRs; as a moderator of the Humans of Julia Discord community; contributing to the SciML: Open Source Software for Scientific Machine Learning organization as part of the DiffEq team; and contributing to the JuliaDynamics organization, developing the package LagrangianDescriptors.jl.

Other relevant packages I am developing myself are ChainPlots.jl, UnitfulBuckinhamPi.jl, and UnitfulAssets.jl.

Among other hobbies, I am also a homebrewer, brewing beer since 2000, and one of the founders of the ACervA Carioca, which played a major role on the growth of the homebrewing community in Brazil. Although mostly a homebrewer, I have made a few commercial beers, partening with microbreweries and restaurants, such as the award winning Colorado Demoiselle (gold medal at the European Beer Star Awards 2008), Colorado Berthô, with Brazil nuts (Castanha do Pará), DadoBier Double Chocolate Stout (DCS); Aprazível Pale Ale; and Mistura Clássica Vertigem IPA (gold medal at the Mondial de La Bière 2014), among others.

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nbbinder's Issues

Not able to install xelatex for testing in github actions

When testing the package, in github actions, with the option to export the package to either latex or pdf, which uses xelatex, I was not able to configure it to install xelatex. I have managed to install pandoc, which is also needed, but not xelatex.

Custom badge

It would be nice to have one, or possibly more, custom badges instead of the hardwired slides badge.

The user would provide the url to the directory of the associated notebooks, an extension to substitute .ipynb and the info to have the badge constructed in shields.io (label, text, and color)

Add option to "tighten" the structure of the notebooks

In relation to issue #1, it would be nice to have the option to tighten the structure of the notebook.

I mean, if the notebooks are, in order,

...
01.01-Blah.ipynb
01.03-Another_Blah.ipynb
...

The "tighten" the notebook would lead rename 01.03-Another_Blah.ipynb to 01.02-Another_Blah.ipynb.

This could be an extra argument, say tighten: bool=True, for the function nbbinder.restructure(), or a different function nbbinder.tighten(path_to_notes:str='.').

I think the best is to be an argument in the restructure function, which will marry better with the configuration file. This could be included in the key restructure_notebook of the YAML config file.

restructure_notebook:
  insert: True
  tigthen: True

Naming collision

Hey 👋,

nice work on this module and open-sourcing it! I saw it mentioned in https://discourse.jupyter.org/t/nbbinder-module-to-generate-table-of-contents-navigator-links-and-badge-links-for-a-collection-of-notebooks/3375/2

I am one of the people involved in Project Binder. Over the last three years we've been running mybinder.org which is based on https://github.com/jupyterhub/binderhub and allows people to start "binders" from their GitHub repositories.

I was wondering what Project Binder and you could do to avoid confusion about what nbbinder does and make sure people don't end up thinking it is related to mybinder.org and the "binders" people create there.

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