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followers: 94.0 following: 10.0 repos: 178.0 gists: 55.0

Name: Robert M Flight

Type: User

Company: University of Kentucky

Bio: Bioinformatics Analyst | R Programmer | Likes Pretty Plots

Location: Lexington, KY

Blog: https://rmflight.github.io

Hello! 👋

I'm a bioinformatics analyst with Hunter Moseley at University of Kentucky's Markey Cancer Center. I spend most of my time both analyzing various -omics datasets (transcriptomics, metabolomics, etc) and developing new tools and methods for analyzing these kinds of data. This means I'm heavily dependent on others sharing their data, and proudly consider myself a research parasite.

I really, really enjoy programming in R, although I also dabble occasionally in Python. I occasionally write about my research, personal projects, and my thoughts on science on my blog.

💬 Ask me about quality control and quality assurance of high-feature -omics datasets, writing R packages, and using {targets} for data analyses.
🛠️ I maintain a few packages related to -omics data analysis.

Robert M Flight's Projects

devtools

Tools to make an R developer's life easier

distill

Distill for R Markdown

distill_testblog

a place to test out the distill blogging framework

documentnumbering

R package for keeping track of numbering in formats that don't support automatic numbering

dot_files

copies of my dot files

error_transformation

paper, talk and poster on how data transformations affect error

example_targets_workflow

an example of building up a targets analysis for -omics data

fakedatawitherror

functions to generate fake data with specific amounts and types of error

flighttools

various r functions I find useful

fmcorrelationbreastcaparp1

Analysis of nucleosome associated PARP1 reads in Breast Cancer cell lines

fmdatabreastcaparp1

PARP1 data

ftc21623

Code and materials repo for FIRST Tech Challenge team 21623, Failing Formally

general

george_rice_polar_expedition

transcripts of newspaper clippings of George Rice's diary, a member of the Greely expedition to Lady Franklin Bay

ggbiplot

A biplot based on ggplot2

ggplot2-book

The ggplot2 book

gh_issues

playing around with gh issues and features

github-paper

Plos in Computational Biology paper related with github for researchers, code, source and document

github-push-action

GitHub actions to push back to repository eg. updated code

github_wrapped

Create a GitHub Wrapped with Quarto Dashboard

gitlabr

an R client for the gitlab API

glmpca

globalprotect-openconnect

A GlobalProtect VPN client (GUI) for Linux based on OpenConnect and built with Qt5, supports SAML auth mode.

go_onmf

examining properties of go onmf procedure

gsa_mst

examining gsa using mst paper

heightchangescycle

project for code to find heights in a photo, and tracking across time

hrbraddins

Additional Addins for RStudio

image_holding

a place to put various images I'm using for projects

importedpackagetimings

Time combinations of loading packages

ismbtweetanalysis

analyzing two different years of ismb tweets

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