To debug your Dockerized Flask application live using Visual Studio Code, follow these steps:

1. Start Dockerized Flask in Debug Mode with the command docker-compose up --build in the project folder:

   

2. Attach VS Code to Dockerized Flask App in Debug Mode by opening the debugger and launching Python: Remote Attach as shown below:

   

The Flask application will now be accessible at http://localhost:5000/dMLPA

# From within the local repo run the following commands.

# Auto generate documentation from docstrings
sphinx-apidoc -f -o docs/apidocs snp_haplotyper/

# Build documentation from source files
(cd docs && make clean) # Optional - removes any cached html files
sphinx-build -b html docs/source docs/build

To view the output open index.html in the build folder.

# From within the local repo run the following commands.

# Auto generate documentation from docstrings
sphinx-apidoc -f -o docs/apidocs snp_haplotyper/

# Build documentation from source files
(cd docs && make clean) # Optional - removes any cached html files
sphinx-build -b html docs/source docs/build

To view the output open index.html in the build folder.

If you find any issues or have suggestions for improvement, feel free to submit a pull request or open an issue in the project's repository.

This project is licensed under the MIT License - see the LICENSE file for details.

Thank you to the authors and contributors of Flask, Cookiecutter, and other open-source libraries that made this template possible.