The code is the implementation of GTB-PPI method “Prediction of Protein-Protein Interactions Based on L1-Regularized Logistic Regression and Gradient Tree Boosting”
- The dataset file contains the S. cerevisiae, H. pylori ,the indepedent data set and PPIs network (one-core network and crossover network).
- The feature extraction file contains the code of PseAAC,PsePSSM,RSIV and AD.
- The dimensional reduction file contains the code of the L1 regularized logistic regression.
- The classifier file file contains the code of GTB,RF,KNN,NB,SVM.